gmane.os.apple.fink.cvs

[cvs] dists/10.7/stable/main/finkinfo/database sqlobject-py.info, 1.5,1.6

Kurt Schwehr — 2012-05-25T23:36:45

Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/database
In directory vz-cvs-3.sog:/tmp/cvs-serv21884

Modified Files:
sqlobject-py.info 
Log Message:
update to 1.3.1


Index: sqlobject-py.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/database/sqlobject-py.info,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -d -r1.5 -r1.6
--- sqlobject-py.info13 May 2012 02:24:31 -00001.5
+++ sqlobject-py.info25 May 2012 23:36:43 -00001.6
< at >< at > -1,10 +1,10 < at >< at >
 Info2: <<
 
 Package: sqlobject-py%type_pkg[python]
-Version: 1.2.2
+Version: 1.3.1
 Revision: 1
 Source: http://pypi.python.org/packages/source/S/SQLObject/SQLObject-%v.tar.gz
-Source-MD5: b2f4e52112e54233a85c075e8af3c62d
+Source-MD5: 404f1b1fa478278e713bdaf17f4a55ad
 Type: python (2.7)
 
 Depends: python%type_pkg[python], formencode-py%type_pkg[python]


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[cvs] experimental/fangism/finkinfo llvm31.info,1.8,1.9

David Fang — 2012-05-25T18:03:40

Update of /cvsroot/fink/experimental/fangism/finkinfo
In directory vz-cvs-3.sog:/tmp/cvs-serv20222

Modified Files:
llvm31.info 
Log Message:
extern templates, take 2


Index: llvm31.info
===================================================================
RCS file: /cvsroot/fink/experimental/fangism/finkinfo/llvm31.info,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -d -r1.8 -r1.9
--- llvm31.info25 May 2012 17:18:01 -00001.8
+++ llvm31.info25 May 2012 18:03:37 -00001.9
< at >< at > -55,10 +55,12 < at >< at >
 
 # explicit template instantiation (needed for 10.7)
 { echo '#include "llvm/Analysis/Dominators.h"' ; \
+echo '#include "llvm/Assembly/Writer.h"' ; \
 grep -e namespace -e EXTERN_TEMPLATE \
 include/llvm/Analysis/Dominators.h | \
 sed -e 's/EXTERN_TEMPLATE_INSTANTIATION(/template /' -e 's/);/;/' ; \
 } > lib/Analysis/Dominators.cpp
+sed -i.orig -e '/EXTERN_TEMPLATE_INSTANTIATION/s|^|// |' include/llvm/Analysis/Dominators.h
 sed -i.orig -e '/DomPrinter/a\
   Dominators.cpp\
 ' lib/Analysis/CMakeLists.txt


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[cvs] experimental/fangism/finkinfo llvm31.info,1.7,1.8

David Fang — 2012-05-25T17:18:04

Update of /cvsroot/fink/experimental/fangism/finkinfo
In directory vz-cvs-3.sog:/tmp/cvs-serv14223

Modified Files:
llvm31.info 
Log Message:
blind attempt to fix 10.7 link error by explicitly instantiating template class


Index: llvm31.info
===================================================================
RCS file: /cvsroot/fink/experimental/fangism/finkinfo/llvm31.info,v
retrieving revision 1.7
retrieving revision 1.8
diff -u -d -r1.7 -r1.8
--- llvm31.info25 May 2012 00:24:14 -00001.7
+++ llvm31.info25 May 2012 17:18:01 -00001.8
< at >< at > -53,6 +53,16 < at >< at >
 test "$darwin_vers" != 8 || \
 sed -i.orig -e '/PRIO_DARWIN_THREAD/s|^|// |' tools/clang/tools/libclang/CIndex.cpp
 
+# explicit template instantiation (needed for 10.7)
+{ echo '#include "llvm/Analysis/Dominators.h"' ; \
+grep -e namespace -e EXTERN_TEMPLATE \
+include/llvm/Analysis/Dominators.h | \
+sed -e 's/EXTERN_TEMPLATE_INSTANTIATION(/template /' -e 's/);/;/' ; \
+} > lib/Analysis/Dominators.cpp
+sed -i.orig -e '/DomPrinter/a\
+  Dominators.cpp\
+' lib/Analysis/CMakeLists.txt
+
 # ld warning about binding of _abort and _raise symbols vs. libSystem's
 # suggests -bind_at_load
 #cp lib/Support/CMakeLists.txt{,.orig}


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[fink/fink] 107187: Only install fink-bld user on operations where ab...

Alexander Hansen — 2012-05-25T16:36:17

  Branch: refs/heads/fink_configure_sets_up_fink_bld
  Home:   https://github.com/fink/fink
  Commit: 1071879ca17772e9077de51a0d924380a9977e97
      https://github.com/fink/fink/commit/1071879ca17772e9077de51a0d924380a9977e97
  Author: Alexander Hansen <alexanderk.hansen< at >gmail.com>
  Date:   2012-05-25 (Fri, 25 May 2012)

  Changed paths:
    M perlmod/Fink/Engine.pm

  Log Message:
  -----------
  Only install fink-bld user on operations where a build could potentially take place.



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Fink-commits< at >lists.sourceforge.net
http://news.gmane.org/gmane.os.apple.fink.cvs

[fink/fink] d142fa: passwd-fink-bld does this too; it seems to fixthe...

Alexander Hansen — 2012-05-25T16:36:17

  Branch: refs/heads/fink_creates_fink-bld
  Home:   https://github.com/fink/fink
  Commit: d142fa2ffcff5fb48ea2638ebbc0095e81bdfdc2
      https://github.com/fink/fink/commit/d142fa2ffcff5fb48ea2638ebbc0095e81bdfdc2
  Author: Alexander Hansen <alexanderk.hansen< at >gmail.com>
  Date:   2012-05-17 (Thu, 17 May 2012)

  Changed paths:
    M fink.info.in

  Log Message:
  -----------
  passwd-fink-bld does this too; it seems to fix the id/gid issue here...



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[cvs] dists/10.7/stable/main/finkinfo/sci matplotlib-py.info, 1.6,1.7 matplotlib-py.patch, 1.1, 1.2

Alexander Hansen — 2012-05-25T16:31:24

Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv7566/10.7/stable/main/finkinfo/sci

Modified Files:
matplotlib-py.info matplotlib-py.patch 
Log Message:
With maintainer consent (works reproducibly)
Updates from 
http://sourceforge.net/tracker/?func=detail&atid=414256&aid=3507073&group_id=17203:
libpng15 for all, build with clang on 10.7+.

Index: matplotlib-py.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/matplotlib-py.patch,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- matplotlib-py.patch24 Aug 2011 19:15:30 -00001.1
+++ matplotlib-py.patch25 May 2012 16:31:22 -00001.2
< at >< at > -52,3 +52,14 < at >< at >
          # this config section lifted directly from Imaging - thanks to
          # the effbot!
  
+--- matplotlib-1.1.0/agg24/include/agg_renderer_outline_aa.h.orig2012-03-17 12:08:05.000000000 -0400
++++ matplotlib-1.1.0/agg24/include/agg_renderer_outline_aa.h2012-03-17 12:08:30.000000000 -0400
+< at >< at > -1365,7 +1365,7 < at >< at >
+         //---------------------------------------------------------------------
+         void profile(const line_profile_aa& prof) { m_profile = &prof; }
+         const line_profile_aa& profile() const { return *m_profile; }
+-        line_profile_aa& profile() { return *m_profile; }
++        const line_profile_aa& profile() { return *m_profile; }
+ 
+         //---------------------------------------------------------------------
+         int subpixel_width() const { return m_profile->subpixel_width(); }

Index: matplotlib-py.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/matplotlib-py.info,v
retrieving revision 1.6
retrieving revision 1.7
diff -u -d -r1.6 -r1.7
--- matplotlib-py.info4 Dec 2011 22:15:19 -00001.6
+++ matplotlib-py.info25 May 2012 16:31:22 -00001.7
< at >< at > -4,13 +4,11 < at >< at >
 
 Package: matplotlib-py%type_pkg[python]
 Version: 1.1.0
-Revision: 2
+Revision: 3
 Source: mirror:sourceforge:matplotlib/matplotlib-%v.tar.gz
 Source-MD5: 57a627f30b3b27821f808659889514c2
 Type: python (2.7)
 
-# FIX: libpng15 failed to work.
-
 Maintainer: Kurt Schwehr <goatbar< at >users.sourceforge.net>
 Depends: <<
  atk1-shlibs (>= 1.20.0-1),
< at >< at > -23,7 +21,7 < at >< at >
  gtk+2-shlibs (>= 2.12.0-1),
  libgettext8-shlibs,
  libiconv,
- libpng14-shlibs,
+ libpng15-shlibs,
  pango1-xft2-ft219-shlibs (>= 1.18.4-4),
  pygobject2-py%type_pkg[python],
  pygtk2-gtk-py%type_pkg[python],
< at >< at > -49,7 +47,7 < at >< at >
  gtk+2-dev (>= 2.12.0-1),
  libgettext8-dev,
  libiconv-dev,
- libpng14,
+ libpng15,
  pango1-xft2-ft219-dev (>= 1.18.4-4),
  pixman (>= 0.10.0-1),
  pkgconfig (>= 0.21-1),
< at >< at > -63,18 +61,13 < at >< at >
 
 GCC: 4.0
 
-# Apple clang and gcc 4.6 compiler gags on matplotlib
-SetCC: llvm-gcc-4.2
-#SetCC: gcc-fsf-4.6
-#SetCXX: g++-fsf-4.6
-
 NoSetCPPFLAGS: True
 SetCPPFLAGS: -I%p/include/pygtk-2.0 -I%p/lib/freetype219/include/freetype2 -I%p/lib/fontconfig2/include -DNSIG=32
 NoSetLDFLAGS: True
 SetLDFLAGS: -L%p/lib/freetype219/lib -L%p/lib/fontconfig2/lib
 
 PatchFile: %{ni}.patch
-PatchFile-MD5: 758179e681590f68d65f36344a5e268f
+PatchFile-MD5: dbd6b6fe0e8bf4ad2115c73d05157783
 PatchScript: sed 's|< at >PREFIX< at >|%p|g' < %{PatchFile} | patch -p1
 
 CompileScript:  <<
< at >< at > -112,6 +105,8 < at >< at >
  Checks for qt, qt4, cairo (their python bindings) but doesn't use
  those test results, so don't bother setting dependencies or forcing
  non-detection of them.
+
+ Use clang fix from https://github.com/mdboom/matplotlib/commit/3b0f5959bbea065b07538f9952ae520ab5a06c27.
 <<
 DescPort: <<
 -DNSIG is only need for the build of the py25 variant.  Don't know why.


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[cvs] dists/10.4/stable/main/finkinfo/sci matplotlib-py.info, 1.7,1.8 matplotlib-py.patch, 1.2, 1.3

Alexander Hansen — 2012-05-25T16:31:24

Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv7566/10.4/stable/main/finkinfo/sci

Modified Files:
matplotlib-py.info matplotlib-py.patch 
Log Message:
With maintainer consent (works reproducibly)
Updates from 
http://sourceforge.net/tracker/?func=detail&atid=414256&aid=3507073&group_id=17203:
libpng15 for all, build with clang on 10.7+.

Index: matplotlib-py.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/matplotlib-py.patch,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -d -r1.2 -r1.3
--- matplotlib-py.patch21 Jan 2012 21:06:07 -00001.2
+++ matplotlib-py.patch25 May 2012 16:31:22 -00001.3
< at >< at > -52,3 +52,14 < at >< at >
          # this config section lifted directly from Imaging - thanks to
          # the effbot!
  
+--- matplotlib-1.1.0/agg24/include/agg_renderer_outline_aa.h.orig2012-03-17 12:08:05.000000000 -0400
++++ matplotlib-1.1.0/agg24/include/agg_renderer_outline_aa.h2012-03-17 12:08:30.000000000 -0400
+< at >< at > -1365,7 +1365,7 < at >< at >
+         //---------------------------------------------------------------------
+         void profile(const line_profile_aa& prof) { m_profile = &prof; }
+         const line_profile_aa& profile() const { return *m_profile; }
+-        line_profile_aa& profile() { return *m_profile; }
++        const line_profile_aa& profile() { return *m_profile; }
+ 
+         //---------------------------------------------------------------------
+         int subpixel_width() const { return m_profile->subpixel_width(); }

Index: matplotlib-py.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/matplotlib-py.info,v
retrieving revision 1.7
retrieving revision 1.8
diff -u -d -r1.7 -r1.8
--- matplotlib-py.info27 Feb 2012 07:28:58 -00001.7
+++ matplotlib-py.info25 May 2012 16:31:21 -00001.8
< at >< at > -4,14 +4,12 < at >< at >
 
 Package: matplotlib-py%type_pkg[python]
 Version: 1.1.0
-Revision: 2
+Revision: 3
 Distribution: (%type_pkg[python] = 24) 10.4, (%type_pkg[python] = 24) 10.5
 Type: python (2.4 2.5 2.6 2.7)
 Source: mirror:sourceforge:matplotlib/matplotlib-%v.tar.gz
 Source-MD5: 57a627f30b3b27821f808659889514c2
 
-# FIX: libpng15 failed to work.
-
 Maintainer: Kurt Schwehr <goatbar< at >users.sourceforge.net>
 Depends: <<
  atk1-shlibs (>= 1.20.0-1),
< at >< at > -24,7 +22,7 < at >< at >
  gtk+2-shlibs (>= 2.12.0-1),
  libgettext8-shlibs,
  libiconv,
- libpng14-shlibs,
+ libpng15-shlibs,
  pango1-xft2-ft219-shlibs (>= 1.18.4-4),
  pygobject2-py%type_pkg[python],
  pygtk2-gtk-py%type_pkg[python],
< at >< at > -50,7 +48,7 < at >< at >
  gtk+2-dev (>= 2.12.0-1),
  libgettext8-dev,
  libiconv-dev,
- libpng14,
+ libpng15,
  pango1-xft2-ft219-dev (>= 1.18.4-4),
  pixman (>= 0.10.0-1),
  pkgconfig (>= 0.21-1),
< at >< at > -64,11 +62,6 < at >< at >
 
 GCC: 4.0
 
-# Apple clang and gcc 4.6 compiler gags on matplotlib
-#SetCC: llvm-gcc-4.2
-#SetCC: gcc-fsf-4.6
-#SetCXX: g++-fsf-4.6
-
 NoSetCPPFLAGS: True
 SetCPPFLAGS: -I%p/include/pygtk-2.0 -I%p/lib/freetype219/include/freetype2 -I%p/lib/fontconfig2/include -DNSIG=32
 NoSetLDFLAGS: True


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[cvs] dists/10.4/stable/main/finkinfo/10.4-EOL/sci matplotlib-py.info,1.3, 1.4 matplotlib-py.patch, 1.2, 1.3

Alexander Hansen — 2012-05-25T16:31:24

Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/10.4-EOL/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv7566/10.4/stable/main/finkinfo/10.4-EOL/sci

Modified Files:
matplotlib-py.info matplotlib-py.patch 
Log Message:
With maintainer consent (works reproducibly)
Updates from 
http://sourceforge.net/tracker/?func=detail&atid=414256&aid=3507073&group_id=17203:
libpng15 for all, build with clang on 10.7+.

Index: matplotlib-py.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/10.4-EOL/sci/matplotlib-py.patch,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -d -r1.2 -r1.3
--- matplotlib-py.patch26 Jan 2012 02:31:09 -00001.2
+++ matplotlib-py.patch25 May 2012 16:31:21 -00001.3
< at >< at > -52,3 +52,14 < at >< at >
          # this config section lifted directly from Imaging - thanks to
          # the effbot!
  
+--- matplotlib-1.1.0/agg24/include/agg_renderer_outline_aa.h.orig2012-03-17 12:08:05.000000000 -0400
++++ matplotlib-1.1.0/agg24/include/agg_renderer_outline_aa.h2012-03-17 12:08:30.000000000 -0400
+< at >< at > -1365,7 +1365,7 < at >< at >
+         //---------------------------------------------------------------------
+         void profile(const line_profile_aa& prof) { m_profile = &prof; }
+         const line_profile_aa& profile() const { return *m_profile; }
+-        line_profile_aa& profile() { return *m_profile; }
++        const line_profile_aa& profile() { return *m_profile; }
+ 
+         //---------------------------------------------------------------------
+         int subpixel_width() const { return m_profile->subpixel_width(); }

Index: matplotlib-py.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/10.4-EOL/sci/matplotlib-py.info,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -d -r1.3 -r1.4
--- matplotlib-py.info26 Apr 2012 21:46:28 -00001.3
+++ matplotlib-py.info25 May 2012 16:31:21 -00001.4
< at >< at > -4,14 +4,12 < at >< at >
 
 Package: matplotlib-py%type_pkg[python]
 Version: 1.1.0
-Revision: 2
+Revision: 3
 Distribution: (%type_pkg[python] = 24) 10.4, (%type_pkg[python] = 24) 10.5
 Type: python (2.4 2.5 2.6 2.7)
 Source: mirror:sourceforge:matplotlib/matplotlib-%v.tar.gz
 Source-MD5: 57a627f30b3b27821f808659889514c2
 
-# FIX: libpng15 failed to work.
-
 Maintainer: Kurt Schwehr <goatbar< at >users.sourceforge.net>
 Depends: <<
  atk1-shlibs (>= 1.20.0-1),
< at >< at > -24,7 +22,7 < at >< at >
  gtk+2-shlibs (>= 2.12.0-1),
  libgettext8-shlibs,
  libiconv,
- libpng14-shlibs,
+ libpng15-shlibs,
  pango1-xft2-ft219-shlibs (>= 1.18.4-4),
  pygobject2-py%type_pkg[python],
  pygtk2-gtk-py%type_pkg[python],
< at >< at > -50,7 +48,7 < at >< at >
  gtk+2-dev (>= 2.12.0-1),
  libgettext8-dev,
  libiconv-dev,
- libpng14,
+ libpng15,
  pango1-xft2-ft219-dev (>= 1.18.4-4),
  pixman (>= 0.10.0-1),
  pkgconfig (>= 0.21-1),
< at >< at > -64,11 +62,6 < at >< at >
 
 GCC: 4.0
 
-# Apple clang and gcc 4.6 compiler gags on matplotlib
-#SetCC: llvm-gcc-4.2
-#SetCC: gcc-fsf-4.6
-#SetCXX: g++-fsf-4.6
-
 NoSetCPPFLAGS: True
 SetCPPFLAGS: -I%p/include/pygtk-2.0 -I%p/lib/freetype219/include/freetype2 -I%p/lib/fontconfig2/include -DNSIG=32
 NoSetLDFLAGS: True


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Live Security Virtual Conference
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threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/

[cvs] dists/10.4/stable/main/finkinfo/sci r-cran-maptools.info, NONE,1.1 r-cran-sp.info, NONE, 1.1 r-cran-sp.patch, NONE,1.1 r-cran-spgrass6.info, NONE, 1.1 r-cran-xml.info, NONE, 1.1

BABA Yoshihiko — 2012-05-25T09:43:29

Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv12028/10.4/stable/main/finkinfo/sci

Added Files:
r-cran-maptools.info r-cran-sp.info r-cran-sp.patch 
r-cran-spgrass6.info r-cran-xml.info 
Log Message:
New upstream version

--- NEW FILE: r-cran-sp.info ---
Package: r-cran-sp
Version: 0.9-99
Revision: 1
Description: GNU R classes and methods for spatial data
Homepage: http://r-spatial.sourceforge.net/
License: GPL
Maintainer:  BABA Yoshihiko <babayoshihiko< at >mac.com>
Source: http://cran.r-project.org/src/contrib/sp_%v.tar.gz
Source-MD5: 191c814e902c717ee4f294696ed97cd9
SourceDirectory: sp
PatchFile: %n.patch
PatchFile-MD5: 3b497f44efaa66cfd91cd14248fc3a39
Depends: r-base
BuildDepends: fink (>= 0.24.12)
CompileScript: <<
  #!/bin/sh -ev
  export TMPDIR=%b/tmp
  pushd ..
  %p/bin/R --verbose CMD build --no-vignettes sp
<<
InstallScript: <<
  #!/bin/sh -ev
  mkdir -p %i/lib/R/site-library
  pushd %b/.. && %p/bin/R --verbose CMD install --library=%i/lib/R/site-library sp
  install_name_tool -id %p/lib/R/site-library/sp/libs/sp.dylib %i/lib/R/site-library/sp/libs/sp.dylib
<<
Shlibs: <<
  %p/lib/R/site-library/sp/libs/sp.dylib 0.0.0 %n (>=0.9-70-1)
<<

SplitOff: <<
  Package: %N-dev
  Description: Headers for CRAN sp
  BuildDependsOnly: true
  Depends: %N (=%v-%r)
  Files: lib/R/site-library/sp/include
<<
--- NEW FILE: r-cran-xml.info ---
Package: r-cran-xml
Version: 3.9-4
Revision: 1
Description: Tools for parsing and generating XML within R
Homepage: http://www.omegahat.org/RSXML/
License: GPL
Maintainer:  BABA Yoshihiko <babayoshihiko< at >mac.com>
Source: http://cran.r-project.org/src/contrib/XML_%v.tar.gz
Source-MD5: c5c06ec7b0c5146683b77f379b7c3151
SourceDirectory: XML
Depends: r-base
BuildDepends: r-base
CompileScript: <<
  #!/bin/sh -ev
  perl -pi -e "s/LIBXML2_OK=0/LIBXML2_OK=1/g" configure
  export TMPDIR=%b/tmp
  pushd ..
  %p/bin/R --verbose CMD build --no-vignettes XML
<<
InstallScript: <<
  #!/bin/sh -ev
  mkdir -p %i/lib/R/site-library
  pushd %b/.. && %p/bin/R --verbose CMD install --library=%i/lib/R/site-library XML
  install_name_tool -id %p/lib/R/site-library/XML/libs/XML.dylib %i/lib/R/site-library/XML/libs/XML.dylib
<<
Shlibs: <<
  %p/lib/R/site-library/XML/libs/XML.dylib 0.0.0 %n (>=0.6-28-1)
<<
DescPackaging: <<
<<
--- NEW FILE: r-cran-sp.patch ---
diff -ruN sp-orig/src/surfaceArea.c sp/src/surfaceArea.c
--- sp-orig/src/surfaceArea.c2011-08-16 14:54:42.000000000 +0900
+++ sp/src/surfaceArea.c2011-08-16 14:55:24.000000000 +0900
< at >< at > -63,12 +63,15 < at >< at >
   }else{
     cellI=0; /* saves us computing 2-d array indices */
   }
-  for(int j=1;j<(*ny-1);j++){
-    for(int i=1;i<(*nx-1);i++){
+  int j;
+  int i;
+  int tri;
+  for(j=1;j<(*ny-1);j++){
+    for(i=1;i<(*nx-1);i++){
       z1 = height(heights,nx,i,j);
       cellArea=0;
       if(!ISNA(z1)){
-for(int tri=0;tri<8;tri++){
+for(tri=0;tri<8;tri++){
   z2=height(heights,nx,i+dxv[tri],j+dyv[tri]);
   /* replace missing adjacent values with the current cell value */
   if(ISNA(z2))z2=z1;

--- NEW FILE: r-cran-maptools.info ---
Package: r-cran-maptools
Version: 0.8-14
Revision: 1
Description: GNU R Tools for handling spatial objects
Homepage: http://cran.r-project.org/web/packages/maptools/index.html
License: GPL
Maintainer:  BABA Yoshihiko <babayoshihiko< at >mac.com>
Source: http://cran.r-project.org/src/contrib/maptools_%v.tar.gz
Source-MD5: 18754449c3cf3cdd71946ffcdcf4e374
SourceDirectory: maptools
Depends: r-base, r-cran-sp
BuildDepends: r-base215
CompileScript: <<
  #!/bin/sh -ev
  export TMPDIR=%b/tmp
  pushd ..
  %p/bin/R --verbose CMD build --no-vignettes maptools
<<
InstallScript: <<
  #!/bin/sh -ev
  mkdir -p %i/lib/R/site-library
  pushd %b/.. && %p/bin/R --verbose CMD install --library=%i/lib/R/site-library maptools
  install_name_tool -id %p/lib/R/site-library/maptools/libs/maptools.dylib %i/lib/R/site-library/maptools/libs/maptools.dylib
<<
Shlibs: <<
  %p/lib/R/site-library/maptools/libs/maptools.dylib 0.0.0 %n (>=0.7-38-1)
<<

--- NEW FILE: r-cran-spgrass6.info ---
Package: r-cran-spgrass6
Version: 0.7-10
Revision: 1
Description: Interface between GRASS 6+ and R
Homepage: http://cran.r-project.org/web/packages/spgrass6/index.html
License: GPL
Maintainer:  BABA Yoshihiko <babayoshihiko< at >mac.com>
Source: http://cran.r-project.org/src/contrib/spgrass6_%v.tar.gz
Source-MD5: 9367d50407a07f6ff32f63d4fef1ea11
SourceDirectory: spgrass6
Depends: r-base, r-cran-sp, r-cran-rgdal, r-cran-xml, grass64-mac | grass64-x11
BuildDepends: r-base, gdal-dev, r-cran-sp-dev, grass64-mac-dev | grass64-x11-dev
CompileScript: <<
  #!/bin/sh -ev
  export TMPDIR=%b/tmp
  pushd ..
  %p/bin/R --verbose CMD build --no-vignettes spgrass6
<<
InstallScript: <<
  #!/bin/sh -ev
  mkdir -p %i/lib/R/site-library
  pushd %b/.. && %p/bin/R --verbose CMD install --library=%i/lib/R/site-library spgrass6
<<
DescPackaging: <<
<<

------------------------------------------------------------------------------
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and 
threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/

[cvs] dists/10.7/stable/main/finkinfo/sci r-cran-maptools.info, 1.2,1.3 r-cran-sp.info, 1.1, 1.2 r-cran-spgrass6.info, 1.1,1.2 r-cran-xml.info, 1.1, 1.2

BABA Yoshihiko — 2012-05-25T09:43:29

Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv12028/10.7/stable/main/finkinfo/sci

Modified Files:
r-cran-maptools.info r-cran-sp.info r-cran-spgrass6.info 
r-cran-xml.info 
Log Message:
New upstream version

Index: r-cran-sp.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/r-cran-sp.info,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- r-cran-sp.info1 Sep 2011 01:36:27 -00001.1
+++ r-cran-sp.info25 May 2012 09:43:27 -00001.2
< at >< at > -1,12 +1,12 < at >< at >
 Package: r-cran-sp
-Version: 0.9-85
+Version: 0.9-99
 Revision: 1
 Description: GNU R classes and methods for spatial data
 Homepage: http://r-spatial.sourceforge.net/
 License: GPL
 Maintainer:  BABA Yoshihiko <babayoshihiko< at >mac.com>
 Source: http://cran.r-project.org/src/contrib/sp_%v.tar.gz
-Source-MD5: a2bc57536084782b4d47c54d106cfc2c
+Source-MD5: 191c814e902c717ee4f294696ed97cd9
 SourceDirectory: sp
 PatchFile: %n.patch
 PatchFile-MD5: 3b497f44efaa66cfd91cd14248fc3a39

Index: r-cran-xml.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/r-cran-xml.info,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- r-cran-xml.info23 Oct 2011 03:55:06 -00001.1
+++ r-cran-xml.info25 May 2012 09:43:27 -00001.2
< at >< at > -1,17 +1,18 < at >< at >
 Package: r-cran-xml
-Version: 3.4-3
+Version: 3.9-4
 Revision: 1
-Description: GNU R Bindings for GDAL
-Homepage: http://sourceforge.net/projects/rgdal/
+Description: Tools for parsing and generating XML within R
+Homepage: http://www.omegahat.org/RSXML/
 License: GPL
 Maintainer:  BABA Yoshihiko <babayoshihiko< at >mac.com>
 Source: http://cran.r-project.org/src/contrib/XML_%v.tar.gz
-Source-MD5: cff3f02fb2ae2c963798a9e9481794dd
+Source-MD5: c5c06ec7b0c5146683b77f379b7c3151
 SourceDirectory: XML
 Depends: r-base
 BuildDepends: r-base
 CompileScript: <<
   #!/bin/sh -ev
+  perl -pi -e "s/LIBXML2_OK=0/LIBXML2_OK=1/g" configure
   export TMPDIR=%b/tmp
   pushd ..
   %p/bin/R --verbose CMD build --no-vignettes XML

Index: r-cran-maptools.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/r-cran-maptools.info,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -d -r1.2 -r1.3
--- r-cran-maptools.info10 Sep 2011 08:34:03 -00001.2
+++ r-cran-maptools.info25 May 2012 09:43:27 -00001.3
< at >< at > -1,15 +1,15 < at >< at >
 Package: r-cran-maptools
-Version: 0.8-10
+Version: 0.8-14
 Revision: 1
 Description: GNU R Tools for handling spatial objects
-Homepage: http://r-spatial.sourceforge.net/
+Homepage: http://cran.r-project.org/web/packages/maptools/index.html
 License: GPL
 Maintainer:  BABA Yoshihiko <babayoshihiko< at >mac.com>
 Source: http://cran.r-project.org/src/contrib/maptools_%v.tar.gz
-Source-MD5: 657c32ad66e69a516cae36c451450614
+Source-MD5: 18754449c3cf3cdd71946ffcdcf4e374
 SourceDirectory: maptools
 Depends: r-base, r-cran-sp
-BuildDepends: r-framework-2.13
+BuildDepends: r-base215
 CompileScript: <<
   #!/bin/sh -ev
   export TMPDIR=%b/tmp

Index: r-cran-spgrass6.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/r-cran-spgrass6.info,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- r-cran-spgrass6.info23 Oct 2011 03:55:06 -00001.1
+++ r-cran-spgrass6.info25 May 2012 09:43:27 -00001.2
< at >< at > -1,12 +1,12 < at >< at >
 Package: r-cran-spgrass6
-Version: 0.7-4
+Version: 0.7-10
 Revision: 1
-Description: GNU R Bindings for GDAL
-Homepage: http://sourceforge.net/projects/rgdal/
+Description: Interface between GRASS 6+ and R
+Homepage: http://cran.r-project.org/web/packages/spgrass6/index.html
 License: GPL
 Maintainer:  BABA Yoshihiko <babayoshihiko< at >mac.com>
 Source: http://cran.r-project.org/src/contrib/spgrass6_%v.tar.gz
-Source-MD5: b4e3e3d2117ca01daffcb2abf86ae2a8
+Source-MD5: 9367d50407a07f6ff32f63d4fef1ea11
 SourceDirectory: spgrass6
 Depends: r-base, r-cran-sp, r-cran-rgdal, r-cran-xml, grass64-mac | grass64-x11
 BuildDepends: r-base, gdal-dev, r-cran-sp-dev, grass64-mac-dev | grass64-x11-dev


------------------------------------------------------------------------------
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and 
threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/

[cvs] dists/10.4/stable/main/finkinfo/sci optim-oct.info, 1.8,1.9 struct-oct.info, 1.8, 1.9 optim-oct.patch, 1.1, NONE

Alexander Hansen — 2012-05-25T02:42:45

Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv15959/10.4/stable/main/finkinfo/sci

Modified Files:
optim-oct.info struct-oct.info 
Removed Files:
optim-oct.patch 
Log Message:
New upstreams.

--- optim-oct.patch DELETED ---

Index: struct-oct.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/struct-oct.info,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -d -r1.8 -r1.9
--- struct-oct.info29 Apr 2012 21:20:57 -00001.8
+++ struct-oct.info25 May 2012 02:42:43 -00001.9
< at >< at > -1,8 +1,8 < at >< at >
 Info2: <<
 Package: struct-oct%type_pkg[oct]
-Version: 1.0.9
+Version: 1.0.10
 Type: oct (3.2.4 3.4.3 3.6.0 3.6.1), forge (struct), gcc (4.6)
-Revision: 5
+Revision: 1
 Maintainer: Alexander Hansen <alexkhansen< at >users.sourceforge.net>
 # unfortunately, Homepage won't do types
 Homepage: http://octave.sourceforge.net/optim/index.html 
< at >< at > -24,16 +24,14 < at >< at >
 test_struct
 <<
 
-License: GPL2+
+License: GPL3+
 
 BuildDepends: <<
   ( %type_pkg[oct] << 360 ) liboctave%type_pkg[oct]-gcc%type_pkg[gcc]-dev, 
   ( %type_pkg[oct] >= 360 ) liboctave%type_pkg[oct]-dev,
   fftw3,
   hdf5.7,
-  fink (>=0.32)
 <<
-RuntimeDepends:   miscellaneous-oct%type_pkg[oct]
 Depends: << 
   octave%type_pkg[oct]-interpreter,
   ( %type_pkg[oct] << 360 ) gcc%type_pkg[gcc]-shlibs
< at >< at > -41,7 +39,8 < at >< at >
 Conflicts: octave-forge
 Replaces: octave-forge-%type_raw[forge] (<< 1.0.4-999)
 
-Source-MD5: b067676d6360dbed7995658fa4266076
+Source-MD5: 6531dbadbadd86b79b74ca86b6d39c9e
+Source: mirror:sourceforge:octave/%type_raw[forge]-%v.tar.gz
 
 #### Insert required changes here ####
 
< at >< at > -51,8 +50,6 < at >< at >
 # since the foo-oct%type_pkg[oct] packages are designed to be built/installed
 # in the same way.
 
-Source: mirror:sourceforge:octave/%type_raw[forge]-%v.tar.gz
-
 NoSetCPPFLAGS: true
 NoSetLDFLAGS: true
 SetLIBRARY_PATH: /usr/X11R6/lib:%p/lib

Index: optim-oct.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/optim-oct.info,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -d -r1.8 -r1.9
--- optim-oct.info29 Apr 2012 21:20:57 -00001.8
+++ optim-oct.info25 May 2012 02:42:43 -00001.9
< at >< at > -1,6 +1,6 < at >< at >
 Info2: <<
 Package: optim%type_pkg[-atlas]-oct%type_pkg[oct]
-Version: 1.0.17
+Version: 1.1.0
 Type: oct (3.2.4 3.4.3 3.6.0 3.6.1), forge (optim), -atlas (boolean), gcc (4.6)
 Revision: 4
 Architecture: <<
< at >< at > -38,13 +38,16 < at >< at >
         nonlin_residmin
         nonlin_curvefit
         LinearRegression
-Zero finding
+Optimization statistics:
+        residmin_stat
+        curvefit_stat
+Zero finding:
         vfzero
-Compatibility
+Compatibility:
         fminunc_compat
         optimset_compat
         linprog
-Numerical derivatives
+Numerical derivatives:
         dfdp
         dcdp
         dfpdp
< at >< at > -53,7 +56,8 < at >< at >
         deriv
         numgradient
         numhessian
-Pivoting
+        jacobs
+Pivoting:
         cpiv_bard
         gjp
 Tests
< at >< at > -74,7 +78,7 < at >< at >
         rosenbrock
         samin_example
 <<
-License: GPL2+/GFDL
+License: OSI-Approved
 
 # All octave-forge packages have to have the following BuildDepends:
 #  octave%type_pkg[oct]-dev | octave%type_pkg[oct]-atlas-dev,
< at >< at > -95,8 +99,8 < at >< at >
   fink (>=0.32)
 <<
 RuntimeDepends: <<
-  miscellaneous-oct%type_pkg[oct] (>= 1.0.11-1), 
-  struct-oct%type_pkg[oct] (>= 1.0.9-1)
+  miscellaneous-oct%type_pkg[oct] (>= 1.0.10-1), 
+  struct-oct%type_pkg[oct] (>= 1.0.10-1)
 <<
 Depends: << 
   (%type_raw[-atlas] = -atlas)  atlas-shlibs,
< at >< at > -107,21 +111,17 < at >< at >
 Conflicts: octave-forge
 Replaces: octave-forge-%type_raw[forge] (<< 1.0.4-999)
 
-Source-MD5: 2c0fec7cab490df5095b21a9c8e64bd1
+Source: mirror:sourceforge:octave/%type_raw[forge]-%v.tar.gz
+Source-MD5: 56df215d1e52ea448987bfcf65c8486f
 
 #### Insert required changes here ####
 
-PatchFile: optim-oct.patch
-PatchFile-MD5: e45618d83c085c4692c5b320bfab8bc7
-
 ######################################
 
 # Do not change anything from this point down, unless absolutely necessary,
 # since the foo-oct%type_pkg[oct] packages are designed to be built/installed
 # in the same way.
 
-Source: mirror:sourceforge:octave/%type_raw[forge]-%v.tar.gz
-
 NoSetCPPFLAGS: true
 NoSetLDFLAGS: true
 SetLIBRARY_PATH: /usr/X11R6/lib:%p/lib
< at >< at > -174,13 +174,10 < at >< at >
 
 DescPackaging: <<
 This package:
-The PatchFile is required for Octave-3.6.0+, which doesn't export LAPACK symbols.
-It's harmless for older Octaves.
 
-This has been added to the upstream development source, and presumably will go
-away at the next version.
+Listed license is GFDL, GPLv3+, Modified BSD, Public Domain.
 
-Common for all octave-forge packages.
+Common for all octave-forge packages:
 
 We read in postinst and prerm template scripts installed by octaveN and modify
 them to use the name of this package because Octave's package manager can't 


------------------------------------------------------------------------------
Live Security Virtual Conference
Exclusive live event will cover all the ways today's security and 
threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/

[cvs] dists/10.7/stable/main/finkinfo/sci optim-oct.info, 1.15,1.16 struct-oct.info, 1.11, 1.12 optim-oct.patch, 1.1, NONE

Alexander Hansen — 2012-05-25T02:42:45

Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv15959/10.7/stable/main/finkinfo/sci

Modified Files:
optim-oct.info struct-oct.info 
Removed Files:
optim-oct.patch 
Log Message:
New upstreams.

--- optim-oct.patch DELETED ---

Index: struct-oct.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/struct-oct.info,v
retrieving revision 1.11
retrieving revision 1.12
diff -u -d -r1.11 -r1.12
--- struct-oct.info20 Apr 2012 21:50:00 -00001.11
+++ struct-oct.info25 May 2012 02:42:43 -00001.12
< at >< at > -1,11 +1,11 < at >< at >
 Info2: <<
 Package: struct-oct%type_pkg[oct]
-Version: 1.0.9
+Version: 1.0.10
 Type: oct (3.2.4 3.4.3 3.6.0 3.6.1), forge (struct), gcc (4.7)
-Revision: 4
+Revision: 1
 Maintainer: Alexander Hansen <alexkhansen< at >users.sourceforge.net>
 # unfortunately, Homepage won't do types
-Homepage:  http://octave.sourceforge.net/optim/index.html 
+Homepage: http://octave.sourceforge.net/optim/index.html 
 Description: Structure manipulations functions for Octave
 DescDetail: <<
 Additional Structure manipulations functions for Octave.
< at >< at > -24,15 +24,13 < at >< at >
 test_struct
 <<
 
-License: GPL2+
+License: GPL3+
 
 BuildDepends: <<
   liboctave%type_pkg[oct]-gcc%type_pkg[gcc]-dev, 
   fftw3,
   hdf5.7,
-  fink (>=0.32)
 <<
-RuntimeDepends:   miscellaneous-oct%type_pkg[oct]
 Depends: << 
   octave%type_pkg[oct]-interpreter,
   ( %type_pkg[oct] << 360 ) gcc%type_pkg[gcc]-shlibs
< at >< at > -40,7 +38,8 < at >< at >
 Conflicts: octave-forge
 Replaces: octave-forge-%type_raw[forge] (<< 1.0.4-999)
 
-Source-MD5: b067676d6360dbed7995658fa4266076
+Source-MD5: 6531dbadbadd86b79b74ca86b6d39c9e
+Source: mirror:sourceforge:octave/%type_raw[forge]-%v.tar.gz
 
 #### Insert required changes here ####
 
< at >< at > -50,8 +49,6 < at >< at >
 # since the foo-oct%type_pkg[oct] packages are designed to be built/installed
 # in the same way.
 
-Source: mirror:sourceforge:octave/%type_raw[forge]-%v.tar.gz
-
 NoSetCPPFLAGS: true
 NoSetLDFLAGS: true
 SetLIBRARY_PATH: /usr/X11R6/lib:%p/lib

Index: optim-oct.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci/optim-oct.info,v
retrieving revision 1.15
retrieving revision 1.16
diff -u -d -r1.15 -r1.16
--- optim-oct.info20 Apr 2012 21:49:59 -00001.15
+++ optim-oct.info25 May 2012 02:42:43 -00001.16
< at >< at > -1,8 +1,8 < at >< at >
 Info2: <<
 Package: optim%type_pkg[-atlas]-oct%type_pkg[oct]
-Version: 1.0.17
+Version: 1.1.0
 Type: oct (3.2.4 3.4.3 3.6.0 3.6.1), forge (optim), -atlas (boolean), gcc (4.7)
-Revision: 3
+Revision: 1
 Maintainer: Alexander Hansen <alexkhansen< at >users.sourceforge.net>
 # unfortunately, Homepage won't do types
 Homepage:  http://octave.sourceforge.net/optim/index.html 
< at >< at > -34,13 +34,16 < at >< at >
         nonlin_residmin
         nonlin_curvefit
         LinearRegression
-Zero finding
+Optimization statistics:
+        residmin_stat
+        curvefit_stat
+Zero finding:
         vfzero
-Compatibility
+Compatibility:
         fminunc_compat
         optimset_compat
         linprog
-Numerical derivatives
+Numerical derivatives:
         dfdp
         dcdp
         dfpdp
< at >< at > -49,7 +52,8 < at >< at >
         deriv
         numgradient
         numhessian
-Pivoting
+        jacobs
+Pivoting:
         cpiv_bard
         gjp
 Tests
< at >< at > -70,7 +74,7 < at >< at >
         rosenbrock
         samin_example
 <<
-License: GPL2+/GFDL
+License: OSI-Approved
 
 # All octave-forge packages have to have the following BuildDepends:
 #  octave%type_pkg[oct]-dev | octave%type_pkg[oct]-atlas-dev,
< at >< at > -91,8 +95,8 < at >< at >
   fink (>=0.32)
 <<
 RuntimeDepends: <<
-  miscellaneous-oct%type_pkg[oct] (>= 1.0.11-1), 
-  struct-oct%type_pkg[oct] (>= 1.0.9-1)
+  miscellaneous-oct%type_pkg[oct] (>= 1.0.10-1), 
+  struct-oct%type_pkg[oct] (>= 1.0.10-1)
 <<
 Depends: << 
   (%type_raw[-atlas] = -atlas)  atlas-shlibs,
< at >< at > -103,21 +107,17 < at >< at >
 Conflicts: octave-forge
 Replaces: octave-forge-%type_raw[forge] (<< 1.0.4-999)
 
-Source-MD5: 2c0fec7cab490df5095b21a9c8e64bd1
+Source: mirror:sourceforge:octave/%type_raw[forge]-%v.tar.gz
+Source-MD5: 56df215d1e52ea448987bfcf65c8486f
 
 #### Insert required changes here ####
 
-PatchFile: optim-oct.patch
-PatchFile-MD5: e45618d83c085c4692c5b320bfab8bc7
-
 ######################################
 
 # Do not change anything from this point down, unless absolutely necessary,
 # since the foo-oct%type_pkg[oct] packages are designed to be built/installed
 # in the same way.
 
-Source: mirror:sourceforge:octave/%type_raw[forge]-%v.tar.gz
-
 NoSetCPPFLAGS: true
 NoSetLDFLAGS: true
 SetLIBRARY_PATH: /usr/X11R6/lib:%p/lib
< at >< at > -170,13 +170,10 < at >< at >
 
 DescPackaging: <<
 This package:
-The PatchFile is required for Octave-3.6.0+, which doesn't export LAPACK symbols.
-It's harmless for older Octaves.
 
-This has been added to the upstream development source, and presumably will go
-away at the next version.
+Listed license is GFDL, GPLv3+, Modified BSD, Public Domain.
 
-Common for all octave-forge packages.
+Common for all octave-forge packages:
 
 We read in postinst and prerm template scripts installed by octaveN and modify
 them to use the name of this package because Octave's package manager can't 


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[cvs] experimental/fangism/finkinfo llvm31.info, 1.6, 1.7 llvm31.patch,1.4, 1.5

David Fang — 2012-05-25T00:24:16

Update of /cvsroot/fink/experimental/fangism/finkinfo
In directory vz-cvs-3.sog:/tmp/cvs-serv29809

Modified Files:
llvm31.info llvm31.patch 
Log Message:
silly me, don't need to apply gtimeout patch twice


Index: llvm31.info
===================================================================
RCS file: /cvsroot/fink/experimental/fangism/finkinfo/llvm31.info,v
retrieving revision 1.6
retrieving revision 1.7
diff -u -d -r1.6 -r1.7
--- llvm31.info25 May 2012 00:05:14 -00001.6
+++ llvm31.info25 May 2012 00:24:14 -00001.7
< at >< at > -22,7 +22,7 < at >< at >
 UseMaxBuildJobs: true
 
 PatchFile: %n.patch
-PatchFile-MD5: 5a01a07c615e9b66ff128a393a438527
+PatchFile-MD5: 5c8403bbeb71387c6d8624f223d24e82
 PatchScript: <<
 #!/bin/sh -ev
 # relocated a few auxiliary directories where they are expected

Index: llvm31.patch
===================================================================
RCS file: /cvsroot/fink/experimental/fangism/finkinfo/llvm31.patch,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -d -r1.4 -r1.5
--- llvm31.patch25 May 2012 00:05:14 -00001.4
+++ llvm31.patch25 May 2012 00:24:14 -00001.5
< at >< at > -1,16 +1,3 < at >< at >
-Index: utils/lit/lit/TestRunner.py
-===================================================================
---- utils/lit/lit/TestRunner.py(revision 156555)
-+++ utils/lit/lit/TestRunner.py(working copy)
-< at >< at > -442,7 +442,7 < at >< at >
-             if script and script[-1][-1] == '\\':
-                 script[-1] = script[-1][:-1] + ln
-             else:

[cvs] experimental/fangism/finkinfo llvm31.info, 1.5, 1.6 llvm31.patch,1.3, 1.4

David Fang — 2012-05-25T00:05:16

Update of /cvsroot/fink/experimental/fangism/finkinfo
In directory vz-cvs-3.sog:/tmp/cvs-serv26166

Modified Files:
llvm31.info llvm31.patch 
Log Message:
more C++ patchery for darwin8,9 g++-4.0.1


Index: llvm31.info
===================================================================
RCS file: /cvsroot/fink/experimental/fangism/finkinfo/llvm31.info,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -d -r1.5 -r1.6
--- llvm31.info24 May 2012 21:58:26 -00001.5
+++ llvm31.info25 May 2012 00:05:14 -00001.6
< at >< at > -22,7 +22,7 < at >< at >
 UseMaxBuildJobs: true
 
 PatchFile: %n.patch
-PatchFile-MD5: fc5ef44faf2885856afb7881dafd9da0
+PatchFile-MD5: 5a01a07c615e9b66ff128a393a438527
 PatchScript: <<
 #!/bin/sh -ev
 # relocated a few auxiliary directories where they are expected
< at >< at > -49,6 +49,10 < at >< at >
 tools/clang/lib/Frontend/InitHeaderSearch.cpp
 fi
 
+# darwin8 missing PRIO_DARWIN_BG constant
+test "$darwin_vers" != 8 || \
+sed -i.orig -e '/PRIO_DARWIN_THREAD/s|^|// |' tools/clang/tools/libclang/CIndex.cpp
+
 # ld warning about binding of _abort and _raise symbols vs. libSystem's
 # suggests -bind_at_load
 #cp lib/Support/CMakeLists.txt{,.orig}
< at >< at > -129,8 +133,8 < at >< at >
 *) : ;;
 esac
 
-CMAKE_OPTIONS="$CMAKE_OPTIONS -DCMAKE_INSTALL_PREFIX=%p/opt/llvm-%v -DCMAKE_BUILD_TYPE=Release -DLLVM_LIT_ARGS:STRING=-v"
-# -DLLVM_ENABLE_ASSERTIONS=OFF
+build_type=Release
+CMAKE_OPTIONS="$CMAKE_OPTIONS -DCMAKE_INSTALL_PREFIX=%p/opt/llvm-%v -DCMAKE_BUILD_TYPE=$build_type -DLLVM_LIT_ARGS:STRING=-v -DLLVM_ENABLE_ASSERTIONS=ON"
 
 #the --max-time option applies to aggregate test time, not individual :(
 #CMAKE_OPTIONS="$CMAKE_OPTIONS -DLLVM_LIT_ARGS="-s -v --max-time=14400"

Index: llvm31.patch
===================================================================
RCS file: /cvsroot/fink/experimental/fangism/finkinfo/llvm31.patch,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -d -r1.3 -r1.4
--- llvm31.patch24 May 2012 21:58:26 -00001.3
+++ llvm31.patch25 May 2012 00:05:14 -00001.4
< at >< at > -120,6 +120,39 < at >< at >
 +  clangSema
 +  LLVMSupport
 +)
+Index: tools/clang/include/clang/Serialization/ASTReader.h
+===================================================================
+--- tools/clang/include/clang/Serialization/ASTReader.h(revision 156555)
++++ tools/clang/include/clang/Serialization/ASTReader.h(working copy)
+< at >< at > -230,10 +230,12 < at >< at >
+   FileManager &FileMgr;
+   DiagnosticsEngine &Diags;
+ 
++public:// workaround to grant access to classes nested within ASTDeclReader
+   /// \brief The semantic analysis object that will be processing the
+   /// AST files and the translation unit that uses it.
+   Sema *SemaObj;
+ 
++private:
+   /// \brief The preprocessor that will be loading the source file.
+   Preprocessor &PP;
+ 
+< at >< at > -689,6 +691,7 < at >< at >
+   /// since the last time the declaration chains were linked.
+   llvm::SmallPtrSet<Decl *, 16> RedeclsDeserialized;
+   
++public:// workaround to grant access to classes nested within ASTDeclReader
+   /// \brief The list of redeclaration chains that still need to be 
+   /// reconstructed.
+   ///
+< at >< at > -700,6 +703,7 < at >< at >
+   /// \brief Keeps track of the elements added to PendingDeclChains.
+   llvm::SmallSet<serialization::DeclID, 16> PendingDeclChainsKnown;
+ 
++private:
+   /// \brief The set of Objective-C categories that have been deserialized
+   /// since the last time the declaration chains were linked.
+   llvm::SmallPtrSet<ObjCCategoryDecl *, 16> CategoriesDeserialized;
 --- tools/clang/include/clang/Frontend/FrontendActions.h2012-05-24 14:48:30.000000000 -0700
 +++ tools/clang/include/clang/Frontend/FrontendActions.h2012-05-24 14:47:37.000000000 -0700
 < at >< at > -123,6 +123,9 < at >< at >


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threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/

[cvs] dists/10.4/stable/main/finkinfo/crypto pycrypto-py.info, 1.5,1.6

Daniel Johnson — 2012-05-24T22:41:05

Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/crypto
In directory vz-cvs-3.sog:/tmp/cvs-serv5908

Modified Files:
pycrypto-py.info 
Log Message:
New upstream pycrypto-py 2.6.


Index: pycrypto-py.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/crypto/pycrypto-py.info,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -d -r1.5 -r1.6
--- pycrypto-py.info13 Jan 2012 20:21:50 -00001.5
+++ pycrypto-py.info24 May 2012 22:41:03 -00001.6
< at >< at > -4,7 +4,7 < at >< at >
 Type: python (2.4 2.5 2.6 2.7 3.1 3.2)
 Distribution: (%type_pkg[python] = 24) 10.5
 
-Version: 2.5
+Version: 2.6
 Revision: 1
 Description: Python Cryptographic Toolkit
 DescDetail: <<
< at >< at > -26,7 +26,7 < at >< at >
 <<
 DescPackaging: Formerly maintained by Pepe Barbe <pepe.barbe< at >gmail.com>
 Source: mirror:custom:p/pycrypto/pycrypto-%v.tar.gz
-Source-MD5: 783e45d4a1a309e03ab378b00f97b291
+Source-MD5: 88dad0a270d1fe83a39e0467a66a22bb
 BuildDepends: gmp5
 #BuildDepends: gmp5, epydoc-py%type_pkg[python], docutils-py%type_pkg[python]
 Depends: python%type_pkg[python], gmp5-shlibs


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threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/

[cvs] dists/10.7/stable/main/finkinfo/crypto pycrypto-py.info, 1.3,1.4

Daniel Johnson — 2012-05-24T22:41:00

Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/crypto
In directory vz-cvs-3.sog:/tmp/cvs-serv5854

Modified Files:
pycrypto-py.info 
Log Message:
New upstream pycrypto-py 2.6.


Index: pycrypto-py.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/crypto/pycrypto-py.info,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -d -r1.3 -r1.4
--- pycrypto-py.info13 Jan 2012 20:21:42 -00001.3
+++ pycrypto-py.info24 May 2012 22:40:56 -00001.4
< at >< at > -3,7 +3,7 < at >< at >
 Package: pycrypto-py%type_pkg[python]
 Type: python (2.6 2.7 3.1 3.2)
 
-Version: 2.5
+Version: 2.6
 Revision: 1
 Description: Python Cryptographic Toolkit
 DescDetail: <<
< at >< at > -25,7 +25,7 < at >< at >
 <<
 DescPackaging: Formerly maintained by Pepe Barbe <pepe.barbe< at >gmail.com>
 Source: mirror:custom:p/pycrypto/pycrypto-%v.tar.gz
-Source-MD5: 783e45d4a1a309e03ab378b00f97b291
+Source-MD5: 88dad0a270d1fe83a39e0467a66a22bb
 BuildDepends: gmp5
 #BuildDepends: gmp5, epydoc-py%type_pkg[python], docutils-py%type_pkg[python]
 Depends: python%type_pkg[python], gmp5-shlibs


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will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/

[cvs] dists/10.7/stable/main/finkinfo/net wireshark.info,1.10,1.11

Max Horn — 2012-05-24T22:05:42

Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/net
In directory vz-cvs-3.sog:/tmp/cvs-serv32598/net

Modified Files:
wireshark.info 
Log Message:
New upstream version

Index: wireshark.info
===================================================================
RCS file: /cvsroot/fink/dists/10.7/stable/main/finkinfo/net/wireshark.info,v
retrieving revision 1.10
retrieving revision 1.11
diff -u -d -r1.10 -r1.11
--- wireshark.info13 Apr 2012 15:20:05 -00001.10
+++ wireshark.info24 May 2012 22:05:40 -00001.11
< at >< at > -15,7 +15,7 < at >< at >
 # maintainership of) the affected package.
 
 Package: wireshark
-Version: 1.6.7
+Version: 1.6.8
 Revision: 1
 Maintainer: Max Horn <max< at >quendi.de>
 BuildDepends: <<
< at >< at > -65,7 +65,7 < at >< at >
 Conflicts: wireshark-ssl (<< 1.6.3-1), ethereal (<< 1.0-1), ethereal-ssl (<< 1.0-1)
 Replaces: wireshark-ssl (<< 1.6.3-1), ethereal (<< 1.0-1), ethereal-ssl (<< 1.0-1)
 Source: mirror:sourceforge:wireshark/wireshark-%v.tar.bz2
-Source-MD5: 7e39f1c0ea4abd8bffa5122df800ca5d
+Source-MD5: dcdc5f4904af5804b622c955a30974e2
 PatchScript: <<
  perl -pi -e 's|-c -o wireshark-filters.o|-c -Os -o wireshark-filters.o|' Makefile.in
 <<


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[cvs] dists/10.4/stable/main/finkinfo/net wireshark.info,1.18,1.19

Max Horn — 2012-05-24T22:05:40

Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/net
In directory vz-cvs-3.sog:/tmp/cvs-serv32586/net

Modified Files:
wireshark.info 
Log Message:
New upstream version

Index: wireshark.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/net/wireshark.info,v
retrieving revision 1.18
retrieving revision 1.19
diff -u -d -r1.18 -r1.19
--- wireshark.info13 Apr 2012 15:20:01 -00001.18
+++ wireshark.info24 May 2012 22:05:38 -00001.19
< at >< at > -15,7 +15,7 < at >< at >
 # maintainership of) the affected package.
 
 Package: wireshark
-Version: 1.6.7
+Version: 1.6.8
 Revision: 1
 Maintainer: Max Horn <max< at >quendi.de>
 BuildDepends: <<
< at >< at > -65,7 +65,7 < at >< at >
 Conflicts: wireshark-ssl (<< 1.6.3-1), ethereal (<< 1.0-1), ethereal-ssl (<< 1.0-1)
 Replaces: wireshark-ssl (<< 1.6.3-1), ethereal (<< 1.0-1), ethereal-ssl (<< 1.0-1)
 Source: mirror:sourceforge:wireshark/wireshark-%v.tar.bz2
-Source-MD5: 7e39f1c0ea4abd8bffa5122df800ca5d
+Source-MD5: dcdc5f4904af5804b622c955a30974e2
 PatchScript: <<
  perl -pi -e 's|-c -o wireshark-filters.o|-c -Os -o wireshark-filters.o|' Makefile.in
 <<


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will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/

[cvs] experimental/fangism/finkinfo llvm31.info, 1.4, 1.5 llvm31.patch,1.2, 1.3

David Fang — 2012-05-24T21:58:28

Update of /cvsroot/fink/experimental/fangism/finkinfo
In directory vz-cvs-3.sog:/tmp/cvs-serv28557

Modified Files:
llvm31.info llvm31.patch 
Log Message:
patch clang header with inline virtual dtor to fix stage3 unittest undefined reference


Index: llvm31.info
===================================================================
RCS file: /cvsroot/fink/experimental/fangism/finkinfo/llvm31.info,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -d -r1.4 -r1.5
--- llvm31.info23 May 2012 20:52:35 -00001.4
+++ llvm31.info24 May 2012 21:58:26 -00001.5
< at >< at > -22,7 +22,7 < at >< at >
 UseMaxBuildJobs: true
 
 PatchFile: %n.patch
-PatchFile-MD5: ed046d342e04fdbbba08b67fe31ec576
+PatchFile-MD5: fc5ef44faf2885856afb7881dafd9da0
 PatchScript: <<
 #!/bin/sh -ev
 # relocated a few auxiliary directories where they are expected
< at >< at > -170,9 +170,6 < at >< at >
 then exit
 fi
 
-# just 1-stage for now
-exit
-
 echo "######## START of BOOTSTRAP STAGE 2: building llvm/clang with stage 1 clang"
 export CCACHE_COMPILERCHECK=content
 export CC=cc-st1-clang
< at >< at > -430,4 +427,5 < at >< at >
 PatchFile contains:
 *CMakeFile fixes, mostly missing dependencies
 *workarounds for C++ accessibility bugs in g++-4.0.x
+*added inline virtual dtor to clang header to fix stage3 undefined ref.
 <<

Index: llvm31.patch
===================================================================
RCS file: /cvsroot/fink/experimental/fangism/finkinfo/llvm31.patch,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -d -r1.2 -r1.3
--- llvm31.patch23 May 2012 20:52:35 -00001.2
+++ llvm31.patch24 May 2012 21:58:26 -00001.3
< at >< at > -120,3 +120,15 < at >< at >
 +  clangSema
 +  LLVMSupport
 +)
+--- tools/clang/include/clang/Frontend/FrontendActions.h2012-05-24 14:48:30.000000000 -0700
++++ tools/clang/include/clang/Frontend/FrontendActions.h2012-05-24 14:47:37.000000000 -0700
+< at >< at > -123,6 +123,9 < at >< at >
+   virtual ASTConsumer *CreateASTConsumer(CompilerInstance &CI,
+                                          StringRef InFile);
+ public:
++  // fang: stage3 bootstrap unittest build wants inline virtual dtor
++  // (else undefined reference at link time)
++  virtual ~SyntaxOnlyAction() { }
+   virtual bool hasCodeCompletionSupport() const { return true; }
+ };
+ 


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[cvs] dists/10.4/stable/main/finkinfo/net libsoup-gnome2.4.1.info, 1.1,1.2 libsoup-gnome2.4.1.patch, 1.1, 1.2

Alexander Hansen — 2012-05-24T19:46:58

Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/net
In directory vz-cvs-3.sog:/tmp/cvs-serv28667/10.4/stable/main/finkinfo/net

Modified Files:
libsoup-gnome2.4.1.info libsoup-gnome2.4.1.patch 
Log Message:
Stop spoiling the soup.

Index: libsoup-gnome2.4.1.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/net/libsoup-gnome2.4.1.patch,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- libsoup-gnome2.4.1.patch2 Nov 2010 15:46:18 -00001.1
+++ libsoup-gnome2.4.1.patch24 May 2012 19:46:56 -00001.2
< at >< at > -102,7 +102,7 < at >< at >
  AC_DEFINE(HAVE_GNOME, 1, [Defined if GNOME support is enabled])
 -
 +if test $with_libsoup_system != no; then
-+   PKG_CHECK_MODULES(LIBSOUP, libsoup-$SOUP_API_VERSION = $VERSION)
++   PKG_CHECK_MODULES(LIBSOUP, libsoup-$SOUP_API_VERSION >= $VERSION)
 +fi
  PKG_CHECK_MODULES(LIBPROXY, libproxy-1.0, :, [AC_MSG_ERROR(dnl
  [Could not find libproxy:

Index: libsoup-gnome2.4.1.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/net/libsoup-gnome2.4.1.info,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- libsoup-gnome2.4.1.info2 Nov 2010 15:46:18 -00001.1
+++ libsoup-gnome2.4.1.info24 May 2012 19:46:56 -00001.2
< at >< at > -20,7 +20,7 < at >< at >
 <<
 BuildDependsOnly: true
 PatchFile: %n.patch
-PatchFile-MD5: 131775b0caeffced9d448885cb2a3230
+PatchFile-MD5: 77c656ba479c7c6d724fa2d9458f7d4d
 PatchScript: <<
 %{default_script}
 <<


------------------------------------------------------------------------------
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threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/

[cvs] dists/10.4/stable/main/finkinfo/10.4-EOL/netlibsoup-gnome2.4.1.info, 1.1, 1.2 libsoup-gnome2.4.1.patch, 1.1, 1.2

Alexander Hansen — 2012-05-24T19:46:58

Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/10.4-EOL/net
In directory vz-cvs-3.sog:/tmp/cvs-serv28667/10.4/stable/main/finkinfo/10.4-EOL/net

Modified Files:
libsoup-gnome2.4.1.info libsoup-gnome2.4.1.patch 
Log Message:
Stop spoiling the soup.

Index: libsoup-gnome2.4.1.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/10.4-EOL/net/libsoup-gnome2.4.1.patch,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- libsoup-gnome2.4.1.patch11 Jul 2011 04:08:34 -00001.1
+++ libsoup-gnome2.4.1.patch24 May 2012 19:46:55 -00001.2
< at >< at > -102,7 +102,7 < at >< at >
  AC_DEFINE(HAVE_GNOME, 1, [Defined if GNOME support is enabled])
 -
 +if test $with_libsoup_system != no; then
-+   PKG_CHECK_MODULES(LIBSOUP, libsoup-$SOUP_API_VERSION = $VERSION)
++   PKG_CHECK_MODULES(LIBSOUP, libsoup-$SOUP_API_VERSION >= $VERSION)
 +fi
  PKG_CHECK_MODULES(LIBPROXY, libproxy-1.0, :, [AC_MSG_ERROR(dnl
  [Could not find libproxy:

Index: libsoup-gnome2.4.1.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/10.4-EOL/net/libsoup-gnome2.4.1.info,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- libsoup-gnome2.4.1.info11 Jul 2011 04:08:34 -00001.1
+++ libsoup-gnome2.4.1.info24 May 2012 19:46:55 -00001.2
< at >< at > -20,7 +20,7 < at >< at >
 <<
 BuildDependsOnly: true
 PatchFile: %n.patch
-PatchFile-MD5: 131775b0caeffced9d448885cb2a3230
+PatchFile-MD5: 77c656ba479c7c6d724fa2d9458f7d4d
 PatchScript: <<
 %{default_script}
 <<


------------------------------------------------------------------------------
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threat landscape has changed and how IT managers can respond. Discussions 
will include endpoint security, mobile security and the latest in malware 
threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/