http://permalink.gmane.org/gmane.os.apple.fink.general hourly 1 1901-01-01T00:00+00:00 http://gmane.org/img/gmane-25t.png http://gmane.org http://permalink.gmane.org/gmane.os.apple.fink.general/34988 <pre>[] OK, I committed a modified version. I haven't seen the crash since. </pre> Martin Costabel 2012-05-23T23:54:23 http://permalink.gmane.org/gmane.os.apple.fink.general/34987 <pre> It should be fixed now. I changed how LDFLAGS got set and lost the "-L/sw/lib" which allows atlas to be detected. The "-framework vecLib" is in the upstream configure script but it doesn't show up in either the -atlas or non-atlas variants. </pre> Alexander Hansen 2012-05-23T16:42:01 http://permalink.gmane.org/gmane.os.apple.fink.general/34986 <pre> Actually that shouldn't be pointing to Accelerate at all, since this is the -atlas variant. :-) And that "-framework vecLib" is potentially troublesome. I'll look into it. </pre> Alexander Hansen 2012-05-23T15:01:49 http://permalink.gmane.org/gmane.os.apple.fink.general/34985 <pre> Martin, You're welcome to make the change to the openmpi packages. As I can't reproduce the failure, you are in a better position to test if the fix is in place before committing. Jack ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Fink-users mailing list Fink-users&lt; at &gt;lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users </pre> Jack Howarth 2012-05-23T12:46:08 http://permalink.gmane.org/gmane.os.apple.fink.general/34984 <pre>On both ppc OSX 10.5 and intel 10.6 updating to arpack-ng-atlas-3.1.1-2 failed ... checking for cheev_... yes configure: error: Cannot find LAPACK libraries ### execution of /tmp/fink.yQR5w failed, exit code 1 Removing runtime build-lock... Removing build-lock package... /sw64/bin/dpkg-lockwait -r fink-buildlock-arpack-ng-atlas-3.1.1-2 (Reading database ... 437575 files and directories currently installed.) Removing fink-buildlock-arpack-ng-atlas-3.1.1-2 ... Failed: phase compiling: arpack-ng-atlas-3.1.1-2 failed Looking at the config.log file I see: ... configure:15905: gcc -o conftest -g -O2 -I/sw64/include -Wl,-dead_strip_dylibs conftest.c -framework vecLib -L/sw64/lib/gcc4.7/lib/gcc/x86_64-apple-darwin10.8.0/4.7.0 -L/sw64/lib/gcc4.7/lib/gcc/x86_64-apple-darwin10.8.0/4.7.0/../../.. -lgfortran -lquadmath -lm &gt;&amp;5 configure:15905: $? = 0 configure:15905: result: yes configure:15985: error: Cannot find LAPACK libraries ... obviously -Wl,-framework,Accelerate is missing. TIA Dominique ----------------</pre> Dominique Dhumieres 2012-05-23T12:37:14 http://permalink.gmane.org/gmane.os.apple.fink.general/34983 <pre>[] This thing is not deterministic, as can be seen from the differing places where it hangs, when it hangs. I did some tests and tried varying some parameters to see whether it is completely random, and I think now it is. In my case (mac mini 4 core), the decisive parameters are certainly not build-as-nobody (which I have not been using), nor Fink's make (my first failing attempts were with make-3.82-1 installed, but it just now also hung with Fink's make removed). I remember now a related discussion of some 6 months ago on this list in the thread "Build of cyrus-sasl2-2.1.23-4 on Tiger/PPC fails due to some lock glibtool is waiting to be removed". There the problem was finally blamed on Fink's libtool, which tries to be helpful and protect parallel builds against a non-existing problem, the remedy killing the healthy patient. In that thread there were some deep contributions by pogma indicating that this might be solved in some recent version of libtool, but apparently nothing came of it, a</pre> Martin Costabel 2012-05-23T11:48:12 http://permalink.gmane.org/gmane.os.apple.fink.general/34982 <pre> On May 21, 2012, at 5:40 PM, Alexander Hansen wrote: I recently updated to the latest upstream version which should also fix building with llvm-gcc. Daniel ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Fink-users mailing list Fink-users&lt; at &gt;lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users </pre> Daniel Johnson 2012-05-23T02:29:35 http://permalink.gmane.org/gmane.os.apple.fink.general/34981 <pre> Ah, this is using the future_os branch from Apr 29th. I wonder if there are any fixes sitting there that haven't been backported to the release fink? ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Fink-users mailing list Fink-users&lt; at &gt;lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users </pre> Jack Howarth 2012-05-22T22:24:15 http://permalink.gmane.org/gmane.os.apple.fink.general/34980 <pre> Interesting...I tried again with 10.7.4/Xcode 4.3.2 and no Fink make and the build worked for me. I've _never_ had a Fink make on this machine, however, so the prior failure was also with Apple's make. </pre> Alexander Hansen 2012-05-22T22:19:04 http://permalink.gmane.org/gmane.os.apple.fink.general/34979 <pre> I just tried the following test on 10.7/xcode4.1, all with "fink -m --build-as-nobody rebuild openmpi": no Fink make installed: works make-3.81-2 installed: lock removal failure make-3.82-1 installed: works Hanspeter ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Fink-users mailing list Fink-users&lt; at &gt;lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users </pre> Hanspeter Niederstrasser 2012-05-22T21:46:21 http://permalink.gmane.org/gmane.os.apple.fink.general/34978 <pre> Not that this has anything to do with this PPC issue, the new X11 is now in /opt. </pre> Hisashi T Fujinaka 2012-05-22T21:13:04 http://permalink.gmane.org/gmane.os.apple.fink.general/34977 <pre> Am 22.05.2012 um 22:53 schrieb Alexander Hansen: Little endian vs. big endian. -- Greetings Pete "Once you've heard Beefheart, it's hard to wash him out of your clothes." – Tom Waits ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Fink-users mailing list Fink-users&lt; at &gt;lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users </pre> Peter Dyballa 2012-05-22T21:02:37 http://permalink.gmane.org/gmane.os.apple.fink.general/34976 <pre> I have no clue what you mean by 'LE' and 'BE', since you didn't define them (at least not recently). In any case, this isn't an important issue because 1) It's cosmetic, and 2) PowerPC support is going away along with Leopard support shortly. ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Fink-users mailing list Fink-users&lt; at &gt;lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users </pre> Alexander Hansen 2012-05-22T20:53:59 http://permalink.gmane.org/gmane.os.apple.fink.general/34975 <pre> Am 22.05.2012 um 18:33 schrieb Alexander Hansen: That's what I see here as well. In the series of packages pygtk2-gtk-pyXY you can find pygtk-demo which shows this also (Application main window, Button Box, ... – interestingly the Stock Item and Icon Browser and Tooltip demo show the icons OK). I think the Images demo even shows the bad background in the lower image. And I am seeing this in MacPorts' XQuartz 2.7.2... But when I build py27-gtk in MacPorts its pygtk-demo displays everything OK. So it's not a bug in XQuartz but one in Fink. Or the interplay between Fink and X11. And it certainly has to do with LE vs. BE... -- Greetings Pete Competition is the great erode of profits. ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in </pre> Peter Dyballa 2012-05-22T20:45:26 http://permalink.gmane.org/gmane.os.apple.fink.general/34974 <pre> Drat. Okay, thanks. -BG ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/_______________________________________________ Fink-users mailing list Fink-users&lt; at &gt;lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users </pre> Brian Grefenstette 2012-05-22T20:37:40 http://permalink.gmane.org/gmane.os.apple.fink.general/34973 <pre> Define "current". The 0.32.6 release does _not_ default to --build-as-nobody. The fink master on github does. You could try adding </pre> Alexander Hansen 2012-05-22T19:38:20 http://permalink.gmane.org/gmane.os.apple.fink.general/34972 <pre> Also you might check if fink's make package is installed. If it is, I would try again without it as well as make sure that it is at the latest 3.82-1 release which eliminated 8 testsuite failures. ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Fink-users mailing list Fink-users&lt; at &gt;lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users </pre> Jack Howarth 2012-05-22T19:28:05 http://permalink.gmane.org/gmane.os.apple.fink.general/34971 <pre> Martin, Doesn't the current fink now default to build-as-nobody? You could try adding BuildAsNobody: false to the info file or using --no-build-as-nobody per the manpage. Jack ps I just rebuilt openmpi-1.5.5-1 here under 10.7 on a dual quad MacPro without issues and the build log does show... sudo -u fink-bld [ENV] sh -c/tmp/fink.UU1U2 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Fink-users mailing list Fink-users&lt; at &gt;lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users </pre> Jack Howarth 2012-05-22T19:25:02 http://permalink.gmane.org/gmane.os.apple.fink.general/34970 <pre> This is the first I've heard of this failure without --build-as-nobody. How many processors were being used? </pre> Alexander Hansen 2012-05-22T19:21:31 http://permalink.gmane.org/gmane.os.apple.fink.general/34969 <pre> Nope. The hangup might be coincidental since I don't have any problem here (10.7.4/Xcode 4.3.2/"Late March" Command Line Tools), but it's hard to say without actually having a reproducible output failure. One note: the default logfile option puts the file in /tmp, which will be wiped when you reboot. If your system does in fact hang again in the same circumstances and you're using the default option, you'll want to log your build elsewhere on the next attempt. Check "man fink" for the available options. </pre> Alexander Hansen 2012-05-22T19:19:32 http://permalink.gmane.org/gmane.os.apple.fink.general/34968 <pre>[] Is there any progress on this? I am just coming home, expecting an update-all run (no -build-as-nobody or anything) to have terminated, only to find a huge log file with 10767 lines of libtool: link: Waiting for /sw/src/fink.build/openmpi-1.5.5-1/openmpi-1.5.5/orte/mca/rmaps/rank_file/.libs/libmca_rmaps_rank_file.a.lock to be removed Any idea how to get this openmpi built on 10.7.3/xcode-4.3.2? For now, I am removing openmpi{,-shlibs}. </pre> Martin Costabel 2012-05-22T18:59:13 Search the mailing list at Gmane query http://search.gmane.org/?group=$group=gmane.os.apple.fink.general